POP-OUT | CLOSE
 
Poliovirus polymerase elongation complex (r5+1_form)
4K4V

Sequence Display  

The sequence display provides a graphical representation of the UniProtKB, PDB - ATOM and PDB - SEQRES sequences. Different 3rd party annotations can be graphically mapped on the sequence and displayed in the Jmol viewer.

The structure 4K4V has in total 6 chains. These are represented by 3 sequence-unique entities.

Currently viewing unique chains only. show all chains
Sequence & Structure Relationships

  Enable Jmol to view annotations in 3D.

 
Chain E : RNA-directed RNA polymerase 3D-POL
FASTA | Sequence & DSSP | Image
Polymer 1
Length: 471 residues
Chain Type: polypeptide(L)
Reference: UniProtKB P03300  
Display Parameters
Identical chains: A | show all chains

show polypeptide chains only
Currently displayed: SEQRES sequence.
Display external (UniProtKB) sequence
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain F : RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3')
FASTA | Sequence & DSSP | Image
Polymer 2
Length: 26 residues
Chain Type: polyribonucleotide
Display Parameters
Identical chains: B | show all chains

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain G : DNA/RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-D(P*C)-3')
FASTA | Sequence & DSSP | Image
Polymer 3
Length: 17 residues
Chain Type: polydeoxyribonucleotide/polyribonucleotide hybrid
Display Parameters
Identical chains: C | show all chains

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Preferences
Jmol parameters
  Show Jmol
  Jmol width Jmol height
Page parameters
  Sequence to view Label residue ids by
  Visible chain types
  Sort chains by
  Font size Residues per row
  Chains to view
  Chains per page
   
 
References
The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
 
Enable Jmol?  
You need to enable Jmol to view annotations in 3D.   Enable Jmol now?