POP-OUT | CLOSE
 
Crystal Structure of Human Atg12~Atg5 Conjugate in Complex with an N-terminal Fragment of Atg16L1
4GDK

Sequence Display  

The sequence display provides a graphical representation of the UniProtKB, PDB - ATOM and PDB - SEQRES sequences. Different 3rd party annotations can be graphically mapped on the sequence and displayed in the Jmol viewer.

The structure 4GDK has in total 6 chains. These are represented by 3 sequence-unique entities.

Currently viewing unique chains only. show all chains
Sequence & Structure Relationships

  Enable Jmol to view annotations in 3D.

 
Chain D : Ubiquitin-like protein ATG12
FASTA | Sequence & DSSP | Image
Polymer 1
Length: 91 residues
Chain Type: polypeptide(L)
Reference: UniProtKB O94817  
Display Parameters
Identical chains: A | show all chains
Currently displayed: SEQRES sequence.
Display external (UniProtKB) sequence
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain E : Autophagy protein 5
FASTA | Sequence & DSSP | Image
Polymer 2
Length: 275 residues
Chain Type: polypeptide(L)
Reference: UniProtKB Q9H1Y0  
Display Parameters
Identical chains: B | show all chains
Currently displayed: SEQRES sequence.
Display external (UniProtKB) sequence
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain F : Autophagy-related protein 16-1
FASTA | Sequence & DSSP | Image
Polymer 3
Length: 36 residues
Chain Type: polypeptide(L)
Reference: UniProtKB Q676U5  
Display Parameters
Identical chains: C | show all chains
Currently displayed: SEQRES sequence.
Display external (UniProtKB) sequence
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Preferences
Jmol parameters
  Show Jmol
  Jmol width Jmol height
Page parameters
  Sequence to view Label residue ids by
  Sort chains by
  Font size Residues per row
  Chains to view
  Chains per page
   
 
References
The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
 
Enable Jmol?  
You need to enable Jmol to view annotations in 3D.   Enable Jmol now?