POP-OUT | CLOSE
 
Antibody 64M-5 Fab in complex with a double-stranded DNA (6-4) photoproduct
3VW3

Sequence Display  

The sequence display provides a graphical representation of the UniProtKB, PDB - ATOM and PDB - SEQRES sequences. Different 3rd party annotations can be graphically mapped on the sequence and displayed in the Jmol viewer.

The structure 3VW3 has in total 4 chains. These are represented by 4 sequence-unique entities.

Currently viewing unique chains only. show all chains
Sequence & Structure Relationships

  Enable Jmol to view annotations in 3D.

 
Chain H : Anti-(6-4) photoproduct antibody 64M-5 Fab (heavy chain)
FASTA | Sequence & DSSP | Image
Polymer 2
Length: 220 residues
Chain Type: polypeptide(L)
Display Parameters

show polypeptide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain L : Anti-(6-4) photoproduct antibody 64M-5 Fab (light chain)
FASTA | Sequence & DSSP | Image
Polymer 1
Length: 217 residues
Chain Type: polypeptide(L)
Display Parameters

show polypeptide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain A : DNA (5'-D(*GP*CP*GP*AP*GP*TP*GP*AP*(64T)P*(5PY)P*AP*TP*GP*GP*AP*CP*GP*G)-3')
FASTA | Sequence & DSSP | Image
Polymer 3
Length: 18 residues
Chain Type: polydeoxyribonucleotide
Display Parameters

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain B : DNA (5'-D(*CP*CP*CP*GP*TP*CP*CP*AP*TP*AP*AP*TP*CP*AP*CP*TP*CP*G)-3')
FASTA | Sequence & DSSP | Image
Polymer 4
Length: 18 residues
Chain Type: polydeoxyribonucleotide
Display Parameters

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Preferences
Jmol parameters
  Show Jmol
  Jmol width Jmol height
Page parameters
  Visible chain types
  Sort chains by
  Font size Residues per row
  Chains per page
   
 
References
The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
 
Enable Jmol?  
You need to enable Jmol to view annotations in 3D.   Enable Jmol now?