POP-OUT | CLOSE
 
Crystal structure of fragment DNA polymerase I from Bacillus stearothermophilus V713P mutant bound to G:dCTP
3HT3

Sequence Display  

The sequence display provides a graphical representation of the UniProtKB, PDB - ATOM and PDB - SEQRES sequences. Different 3rd party annotations can be graphically mapped on the sequence and displayed in the Jmol viewer.

The structure 3HT3 has in total 6 chains. These are represented by 3 sequence-unique entities.

Currently viewing unique chains only. show all chains
Sequence & Structure Relationships

  Enable Jmol to view annotations in 3D.

 
Chain A : DNA polymerase I, large fragment
FASTA | Sequence & DSSP | Image
Polymer 1
Length: 579 residues
Chain Type: polypeptide(L)
Display Parameters
Identical chains: D | show all chains

show polypeptide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain C : 5'-D(*AP*CP*GP*GP*CP*GP*TP*GP*AP*TP*CP*G)-3'
FASTA | Sequence & DSSP | Image
Polymer 3
Length: 12 residues
Chain Type: polydeoxyribonucleotide
Display Parameters
Identical chains: F | show all chains

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain E : 5'-D(*CP*GP*AP*TP*CP*AP*CP*GP*(DOC))-3'
FASTA | Sequence & DSSP | Image
Polymer 2
Length: 9 residues
Chain Type: polydeoxyribonucleotide
Display Parameters
Identical chains: B | show all chains

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Preferences
Jmol parameters
  Show Jmol
  Jmol width Jmol height
Page parameters
  Visible chain types
  Sort chains by
  Font size Residues per row
  Chains to view
  Chains per page
   
 
References
The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
 
Enable Jmol?  
You need to enable Jmol to view annotations in 3D.   Enable Jmol now?