POP-OUT | CLOSE
 
Decoding Center & Peptidyl transferase center from the X-ray structure of the Thermus thermophilus 70S ribosome, aligned to the low resolution Cryo-EM map of E.coli 70S Ribosome
1MVR

Sequence Display  

The sequence display provides a graphical representation of the UniProtKB, PDB - ATOM and PDB - SEQRES sequences. Different 3rd party annotations can be graphically mapped on the sequence and displayed in the Jmol viewer.

The structure 1MVR has in total 8 chains. These are represented by 8 sequence-unique entities.

Currently viewing unique chains only. show all chains
Sequence & Structure Relationships

  Enable Jmol to view annotations in 3D.

 
L,O,1 A,B,C D,E Next
 
Chain L : 50S ribosomal protein L11
FASTA | Sequence & DSSP | Image
Polymer 8
Length: 140 residues
Chain Type: polypeptide(L)
Reference: UniProtKB P29395  
Display Parameters

show polypeptide chains only
Currently displayed: SEQRES sequence.
Display external (UniProtKB) sequence
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain O : 30S RIBOSOMAL PROTEIN S12
FASTA | Sequence & DSSP | Image
Polymer 7
Length: 135 residues
Chain Type: polypeptide(L)
Reference: UniProtKB Q5SHN3  
Display Parameters

show polypeptide chains only
Currently displayed: SEQRES sequence.
Display external (UniProtKB) sequence
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Chain 1 : mRNA, triplet codon (A-site)
FASTA | Sequence & DSSP | Image
Polymer 1
Length: 3 residues
Chain Type: polyribonucleotide
Display Parameters

show polynucleotide chains only
Mouse over an annotation to see more details. Click annotation to enable Jmol.
 
Annotations
Loading...
 
Preferences
Jmol parameters
  Show Jmol
  Jmol width Jmol height
Page parameters
  Sequence to view Label residue ids by
  Visible chain types
  Sort chains by
  Font size Residues per row
  Chains per page
   
 
References
The PDB to UniProt mapping is based on the data provided by the EBI SIFTS project. See also Velankar et al., Nucleic Acids Research 33, D262-265 (2005).
 
Enable Jmol?  
You need to enable Jmol to view annotations in 3D.   Enable Jmol now?