4LD0

T. thermophilus RuvC in complex with Holliday junction substrate

Structural Biology Knowledgebase: 4LD0 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.75 Å
  • R-Value Free: 0.329
  • R-Value Work: 0.267

Literature

Macromolecules
Sequence Display for 4LD0

Classification: HYDROLASE / DNA

Total Structure Weight: 52965.64


Macromolecule Entities
Molecule Chains Length Organism Details
Crossover junction endodeoxyribonuclease RuvC A, B 169 Thermus thermophilus EC#: 3.1.22.4 IUBMB
Fragment: RuvC
Mutation: E70Q
Gene Name(s): ruvC TTHA1090
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Macromolecule Entities
Molecule Chains Length Organism Details
DNA 31-MER C 31 synthetic
DNA 13-MER D 13 synthetic
DNA 11-MER F 11 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.75 Å
  • R-Value Free: 0.329
  • R-Value Work: 0.267
  • Space Group: P 32 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 106.36 α = 90.00
b = 106.36 β = 90.00
c = 132.65 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-24
  • Released Date: 2013-09-04
  • Deposition author(s): Gorecka, K.M., Komorowska, W., Nowotny, M.

Revision History

  • 2013-12-04
    Type: Citation | Details: Citation update
  • 2013-09-18
    Type: Citation | Details: Citation update