4K4U

Poliovirus polymerase elongation complex (r5_form)

Structural Biology Knowledgebase: 4K4U SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.276
  • R-Value Work: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4K4U

Classification: Transferase / rna

Total Structure Weight: 142178.97


Macromolecule Entities
Molecule Chains Length Organism Details
RNA-directed RNA polymerase 3D-POL A, E 471 Enterovirus c EC#: 2.7.7.48 IUBMB
Fragment: unp residues 1749-2209
Mutation: C290M, L446D
Gene Name(s):
Macromolecule Entities
Molecule Chains Length Organism Details
RNA (5'-R(*AP*AP*GP*UP*CP*UP*CP*CP*AP*GP*GP*UP*CP*UP*CP*UP*CP*UP*CP*GP*UP*CP*GP*AP*AP*A)-3') B, F 26 synthetic
RNA (5'-R(*UP*GP*UP*UP*CP*GP*AP*CP*GP*AP*GP*AP*GP*AP*GP*A)-3') C, G 16 synthetic
RNA (5'-R(P*GP*GP*GP*GP*GP*AP*GP*AP*UP*GP*A)-3') D, H 11 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, E SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.85 Å
  • R-Value Free: 0.276
  • R-Value Work: 0.219
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 63.65 α = 101.08
b = 63.87 β = 106.22
c = 105.10 γ = 103.03

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-04-12
  • Released Date: 2013-05-22
  • Deposition author(s): Gong, P., Peersen, O.B.

Revision History

  • 2013-07-03
    Type: Citation | Details: Citation update