4JUI

crystal structure of tannase from from Lactobacillus plantarum

Structural Biology Knowledgebase: 4JUI SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.153

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4JUI

Classification: HYDROLASE

Total Structure Weight: 103354.93

Macromolecule Entities
Molecule Chains Length Organism Details
Tannase A, B 470 Lactobacillus plantarum Mutation: S163A
Gene Name(s): tanLpl
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
EGR
Query on EGR

A, B ethyl 3,4,5-trihydroxybenzoate
ethyl gallate (Synonym)
C9 H10 O5
VFPFQHQNJCMNBZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PG4
Query on PG4

A TETRAETHYLENE GLYCOL
C8 H18 O5
UWHCKJMYHZGTIT-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PGE
Query on PGE

A, B TRIETHYLENE GLYCOL
C6 H14 O4
ZIBGPFATKBEMQZ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PEG
Query on PEG

A, B DI(HYDROXYETHYL)ETHER
C4 H10 O3
MTHSVFCYNBDYFN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.180
  • R-Value Work: 0.153
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 47.21 α = 70.66
b = 62.94 β = 85.49
c = 84.41 γ = 79.51

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-03-24
  • Released Date: 2013-05-22
  • Deposition author(s): Ren, B., Wu, M., Wang, Q., Peng, X., Wen, H., McKinstry, W.J., Chen, Q.

Revision History

No revisions since initial release