4JLZ

Structure of porcine cGAS in complex with bound UTP

Structural Biology Knowledgebase: 4JLZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.172

Literature

Macromolecules
Sequence Display for 4JLZ

Classification: DNA BINDING PROTEIN

Total Structure Weight: 86092.79

Macromolecule Entities
Molecule Chains Length Organism Details
Uncharacterized protein A, B 366 Sus scrofa EC#: 2.7.7.86 IUBMB
Fragment: UNP residues 135-495
Gene Name(s): MB21D1 Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UTP
Query on UTP

A, B URIDINE 5'-TRIPHOSPHATE
C9 H15 N2 O15 P3
PGAVKCOVUIYSFO-XVFCMESISA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ZN
Query on ZN

A, B ZINC ION
Zn
PTFCDOFLOPIGGS-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.27 Å
  • R-Value Free: 0.207
  • R-Value Work: 0.172
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 80.56 α = 90.00
b = 97.69 β = 90.00
c = 106.96 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-03-13
  • Released Date: 2013-06-12
  • Deposition author(s): Civril, F., Hopfner, K.P.

Revision History

  • 2013-07-10
    Type: Citation | Details: Citation update