4I76

Crystal structure of transcriptional regulator TM1030 with octanol

Structural Biology Knowledgebase: 4I76 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.256
  • R-Value Work: 0.193

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4I76

Classification: Transcription Regulator

Total Structure Weight: 49265.29

Macromolecule Entities
Molecule Chains Length Organism Details
Transcriptional regulator, TetR family A, B 202 Thermotoga maritima Gene Name(s): TM_1030
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
OC9
Query on OC9

A OCTAN-1-OL
C8 H18 O
KBPLFHHGFOOTCA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

Unit Cell:

Length (Å) Angle (°)
a = 121.91 α = 90.00
b = 50.43 β = 129.15
c = 88.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-11-30
  • Released Date: 2013-01-02
  • Deposition author(s): Koclega, K.D., Chruszcz, M., Cooper, D.R., Petkowski, J.J., Tkaczuk, K.L., Joachimiak, A., Minor, W., Midwest Center for Structural Genomics (MCSG)

Revision History

No revisions since initial release