4HL7

Crystal structure of nicotinate phosphoribosyltransferase (target NYSGR-026035) from Vibrio cholerae

Structural Biology Knowledgebase: 4HL7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.161

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4HL7

Classification: TRANSFERASE

Total Structure Weight: 104092.64

Macromolecule Entities
Molecule Chains Length Organism Details
Nicotinate phosphoribosyltransferase A, B 446 Vibrio cholerae EC#: 6.3.4.21 IUBMB
Gene Name(s): pncB VC_A0098
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A, B L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.201
  • R-Value Work: 0.161
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 83.42 α = 90.00
b = 147.64 β = 90.00
c = 74.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-10-16
  • Released Date: 2012-11-14
  • Deposition author(s): Mulichak, A.M., Sauder, J.M., Keefe, L.J., Burley, S.K., Almo, S.C., New York Structural Genomics Research Consortium (NYSGRC)

Revision History

No revisions since initial release