4H83

Crystal structure of Mandelate racemase/muconate lactonizing enzyme (EFI target:502127)

Structural Biology Knowledgebase: 4H83 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.147

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4H83

Classification: ISOMERASE

Total Structure Weight: 261446.83

Macromolecule Entities
Molecule Chains Length Organism Details
Mandelate racemase/muconate lactonizing enzyme A, B, C..., D, E, FA, B, C, D, E, F 388 Marine actinobacterium phsc20c1

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BCT
Query on BCT

A, F BICARBONATE ION
C H O3
BVKZGUZCCUSVTD-UHFFFAOYSA-M
Ligand Explorer
 
JSmol
GOL
Query on GOL

F GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
NA
Query on NA

A, B, C, D, E, F SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
PO4
Query on PO4

C PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.09 Å
  • R-Value Free: 0.204
  • R-Value Work: 0.147
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 89.98 α = 90.00
b = 102.95 β = 90.00
c = 234.43 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-21
  • Released Date: 2012-10-10
  • Deposition author(s): Kim, J., Toro, R., Bhosle, R., Al Obaidi, N.F., Morisco, L.L., Wasserman, S.R., Sojitra, S., Washington, E., Scott Glenn, A., Chowdhury, S., Evans, B., Hammonds, J., Stead, M., Hillerich, B., Love, J., Seidel, R.D., Imker, H.J., Gerlt, J.A., Almo, S.C., Enzyme Function Initiative (EFI)

Revision History

  • 2012-11-14
    Type: Function and keywords | Details: --
  • 2012-11-14
    Type: Entry authorship | Details: --
  • 2012-11-14
    Type: Entry title | Details: --