4GZM

Crystal structure of RAC1 F28L mutant

Structural Biology Knowledgebase: 4GZM SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.254

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4GZM

Classification: HYDROLASE

Total Structure Weight: 46527.49

Macromolecule Entities
Molecule Chains Length Organism Details
Ras-related C3 botulinum toxin substrate 1 A, B 204 Homo sapiens EC#: 3.6.5.2 IUBMB
Fragment: UNP residues 2-177
Mutation: F28L
Gene Name(s): RAC1 Gene View TC25 MIG5

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GSP
Query on GSP

A, B 5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
C10 H16 N5 O13 P3 S
XOFLBQFBSOEHOG-UUOKFMHZSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.288
  • R-Value Work: 0.254
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 40.09 α = 90.00
b = 98.81 β = 90.21
c = 51.99 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-09-06
  • Released Date: 2012-12-12
  • Deposition author(s): Ha, B.H., Boggon, T.J.

Revision History

  • 2013-01-30
    Type: Citation | Details: Citation update
  • 2013-01-16
    Type: Citation | Details: Citation update