4G11

X-ray structure of PI3K-gamma bound to a 4-(morpholin-4-yl)- (6-oxo-1,6-dihydropyrimidin-2-yl)amide inhibitor

Structural Biology Knowledgebase: 4G11 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.349
  • R-Value Work: 0.282

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4G11

Classification: Transferase / Transferase Inhibitor

Total Structure Weight: 111042.26

Macromolecule Entities
Molecule Chains Length Organism Details
Phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit gamma isoform A 966 Homo sapiens EC#: 2.7.1.153 IUBMB
Fragment: UNP residues 144-1102
Gene Name(s): PIK3CG Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
0W7
Query on 0W7

A 2-[4-(morpholin-4-yl)-6-oxo-1,6-dihydropyrimidin- 2-yl]-N-phenylacetamide
C16 H18 N4 O3
FPFCFOIMTFHSNY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
0W7 IC50: >10000 nM (100) BindingDB

N/A in BindingMoad
IC50: 10000 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.349
  • R-Value Work: 0.282
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 140.63 α = 90.00
b = 67.38 β = 96.14
c = 105.89 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-10
  • Released Date: 2012-11-14
  • Deposition author(s): Morales, R.

Revision History

No revisions since initial release