4FZZ

Exonuclease X in complex with 5' overhanging duplex DNA

Structural Biology Knowledgebase: 4FZZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.223

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4FZZ

Classification: Hydrolase / DNA

Total Structure Weight: 50739.46


Macromolecule Entities
Molecule Chains Length Organism Details
Exodeoxyribonuclease 10 A, B 175 Escherichia coli EC#: 3.1.11 IUBMB
Fragment: UNP residues 1-167
Gene Name(s): exoX yobC b1844 JW1833
Macromolecule Entities
Molecule Chains Length Organism Details
DNA (5'-D(*GP*TP*CP*AP*TP*TP*GP*TP*GP*GP*AP*TP*CP*CP*GP*AP*G)-3') C, D 17 synthetic

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NA
Query on NA

A, B, C, D SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.8 Å
  • R-Value Free: 0.260
  • R-Value Work: 0.223
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 37.19 α = 90.00
b = 79.01 β = 90.00
c = 156.01 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-08
  • Released Date: 2013-07-03
  • Deposition author(s): Wang, T., Sun, H., Cheng, F., Bi, L., Jiang, T.

Revision History

  • 2013-10-09
    Type: Citation | Details: Citation update