Crystal structure of spleen tyrosine kinase complexed with N-{(S)-1-[7-(3,4-Dimethoxy-phenylamino)-thiazolo[5,4-d]pyrimidin-5-yl]-pyrrolidin-3-yl}-terephthalamic acid
4FYO
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Transferase/transferase Inhibitor
    Structure Weight: 34404.86
    Molecule: Tyrosine-protein kinase SYK
    Polymer: 1 Type: protein Length: 291
    Chains: A
    EC#: 2.7.10.2   
    Fragment: RESIDUES 356-635, PROTEIN KINASE DOMAIN
    Organism: Homo sapiens
    Gene Name: Gene View for SYK
    UniProtKB: Search PDB | P43405   Protein Feature View
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Spodoptera frugiperda  
     
  •   Related PDB Entries Hide
    Identifier Details
    4FYN    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    0VF
    Search 
    Download 
    0VF C25 H24 N6 O5 S
    4-{[(3S)-1-{7-[(3,4-dimethoxyphenyl)amino][1,3]thiazolo[5,4- d]pyrimidin-5-yl}pyrrolidin-3-yl]carbamoyl}benzoic acid
     
  •   External Ligand Annotations Hide
    Identifier   Binding Affinity (Sequence Identity %)
    0VF
    Search 
    Download 
    0VF
    N/Ain BindingDB
    IC50: 47 nM - data from BindingMOAD  
    IC50: 47 nM - data from PDBbind  
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Kuglstatter, A.,  Slade, M.

    Deposition:   2012-07-05
    Release:   2013-01-30
     
  •   Revision History    Hide
    No revisions since initial release
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   1.40
    R-Value: 0.220 (obs.)
    R-Free: 0.240
    Space Group: P 21 21 21
    Unit Cell:
      Length [Å] Angles [°]
    a = 39.95 α = 90.00 
    b = 85.56 β = 90.00 
    c = 90.03 γ = 90.00