4BR9

Legionella pneumophila NTPDase1 crystal form II, closed, apo

Structural Biology Knowledgebase: 4BR9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.171
  • R-Value Work: 0.127

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4BR9

Classification: HYDROLASE

Total Structure Weight: 84238.33

Macromolecule Entities
Molecule Chains Length Organism Details
ECTONUCLEOSIDE TRIPHOSPHATE DIPHOSPHOHYDROLASE I A, B 368 Legionella pneumophila EC#: 3.6.1.5 IUBMB
Fragment: RESIDUES 35-393
Mutation: E137D, A149V

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
GOL
Query on GOL

A GLYCEROL
GLYCERIN; PROPANE-1,2,3-TRIOL (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A, B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.4 Å
  • R-Value Free: 0.171
  • R-Value Work: 0.127
  • Space Group: P 1 21 1

Unit Cell:

Length (Å) Angle (°)
a = 62.50 α = 90.00
b = 86.20 β = 107.14
c = 72.21 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-06-04
  • Released Date: 2013-07-17
  • Deposition author(s): Zebisch, M., Schaefer, P., Lauble, P., Straeter, N.

Revision History

  • 2013-12-25
    Type: Function and keywords | Details: KEYWDS
  • 2013-10-02
    Type: Other | Details: MTRIX2, MTRIX3, MTRIX1
  • 2013-08-28
    Type: Citation | Details: JRNL