4B3I

Crystal structure of Mycobacterium tuberculosis fatty acid beta- oxidation complex with CoenzymeA bound at the hydratase active sites

Structural Biology Knowledgebase: 4B3I SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.186

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4B3I

Classification: OXIDOREDUCTASE / TRANSFERASE

Total Structure Weight: 246674.21

Macromolecule Entities
Molecule Chains Length Organism Details
FATTY ACID BETA-OXIDATION COMPLEX ALPHA-CHAIN FADB A, B 736 Mycobacterium tuberculosis EC#: 1.1.1.35 IUBMB 4.2.1.17 IUBMB
Gene Name(s): fadB Rv0860 LH57_04690
FATTY ACID BETA-OXIDATION COMPLEX BETA-CHAIN FADA C, D 403 Mycobacterium tuberculosis Gene Name(s): fadA Rv0859

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

A, B COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
ADP
Query on ADP

A, C ADENOSINE-5'-DIPHOSPHATE
C10 H15 N5 O10 P2
XTWYTFMLZFPYCI-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A, B, C, D SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.63 Å
  • R-Value Free: 0.229
  • R-Value Work: 0.186
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 248.16 α = 90.00
b = 135.97 β = 110.43
c = 118.16 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-07-24
  • Released Date: 2013-03-27
  • Deposition author(s): Venkatesan, R., Wierenga, R.K.

Revision History

  • 2013-05-29
    Type: Citation | Details: JRNL