4AX7

Hypocrea jecorina Cel6A D221A mutant soaked with 4-Methylumbelliferyl- beta-D-cellobioside

Structural Biology Knowledgebase: 4AX7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AX7

Classification: HYDROLASE

Total Structure Weight: 164826.45

Macromolecule Entities
Molecule Chains Length Organism Details
EXOGLUCANASE 2 A, B, C, D 363 Trichoderma reesei EC#: 3.2.1.91 IUBMB
Fragment: CATALYTIC DOMAIN, RESIDUES 109-471
Mutation: D221A
Gene Name(s): cbh2

Small Molecules
Ligands 4 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
NAG
Query on NAG

A, B, C, D N-ACETYL-D-GLUCOSAMINE
C8 H15 N O6
OVRNDRQMDRJTHS-FMDGEEDCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
BGC
Query on BGC

A, B, C, D BETA-D-GLUCOSE
C6 H12 O6
WQZGKKKJIJFFOK-VFUOTHLCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MAN
Query on MAN

A, B, C, D ALPHA-D-MANNOSE
C6 H12 O6
WQZGKKKJIJFFOK-PQMKYFCFSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
4MU
Query on 4MU

A, B, C, D 7-hydroxy-4-methyl-2H-chromen-2-one
4-methylumbelliferone (Synonym)
C10 H8 O3
HSHNITRMYYLLCV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.221
  • R-Value Work: 0.189
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.82 α = 103.97
b = 74.68 β = 103.43
c = 93.29 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-06-11
  • Released Date: 2013-01-23
  • Deposition author(s): Wu, M., Nerinckx, W., Piens, K., Ishida, T., Hansson, H., Stahlberg, J., Sandgren, M.

Revision History

No revisions since initial release