4APO

AIP TPR domain in complex with human Tomm20 peptide

Structural Biology Knowledgebase: 4APO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.181

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4APO

Classification: SIGNALING PROTEIN / PEPTIDE

Total Structure Weight: 39943.40

Macromolecule Entities
Molecule Chains Length Organism Details
AH RECEPTOR-INTERACTING PROTEIN A, B 165 Homo sapiens Fragment: TETRATRICOPEPTIDE REPEAT DOMAIN, RESIDUES 172-313
Mutation: D172A
Gene Name(s): AIP Gene View XAP2
MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM20 HOMOLOG D, E 6 Homo sapiens Fragment: RESIDUES 140-145
Gene Name(s): TOMM20 Gene View KIAA0016

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
12P
Query on 12P

B DODECAETHYLENE GLYCOL
POLYETHYLENE GLYCOL PEG400 (Synonym)
C24 H50 O13
WRZXKWFJEFFURH-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

B SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.89 Å
  • R-Value Free: 0.234
  • R-Value Work: 0.181
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 60.20 α = 90.00
b = 106.82 β = 100.85
c = 68.47 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-04-04
  • Released Date: 2013-01-23
  • Deposition author(s): Morgan, R.M.L., Roe, S.M., Pearl, L.H., Prodromou, C.

Revision History

No revisions since initial release