4AFY

Crystal structure of the FimX EAL domain in complex with reaction product pGpG

Structural Biology Knowledgebase: 4AFY SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.208

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 4AFY

Classification: HYDROLASE

Total Structure Weight: 61975.01


Macromolecule Entities
Molecule Chains Length Organism Details
FIMX A, B 274 Pseudomonas aeruginosa EC#: 3.1.4.52 IUBMB
Fragment: EAL DOMAIN, RESIDUES 439-691
Macromolecule Entities
Molecule Chains Length Organism Details
5'-R(*GP*GP)-3' C, D 2 Synthetic construct

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
NA
Query on NA

A SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
Ligand Explorer
 
JSmol

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.01 Å
  • R-Value Free: 0.239
  • R-Value Work: 0.208
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 104.33 α = 90.00
b = 104.33 β = 90.00
c = 154.24 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2012-01-23
  • Released Date: 2013-01-09
  • Deposition author(s): Robert-Paganin, J., Nonin-Lecomte, S., Rety, S.

Revision History

  • 2015-10-21
    Type: Source and taxonomy | Details: SOURCE
  • 2013-01-30
    Type: Citation | Details: JRNL