4ABQ

CRYSTAL STRUCTURE OF TRANSTHYRETIN IN COMPLEX WITH LIGAND C-1

Structural Biology Knowledgebase: 4ABQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.204

Literature

Macromolecules
Sequence Display for 4ABQ

Classification: TRANSPORT PROTEIN

Total Structure Weight: 27232.57

Macromolecule Entities
Molecule Chains Length Organism Details
TRANSTHYRETIN A, B 124 Homo sapiens Fragment: RESIDUES 21-144
Gene Name(s): TTR Gene View PALB
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
4V2
Query on 4V2

A, B 3-(5-MERCAPTO-1,3,4-OXADIAZOL-2-YL)-PHENOL
C8 H6 N2 O2 S
CNOGHDSTUCQSOV-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.242
  • R-Value Work: 0.204
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.76 α = 90.00
b = 42.66 β = 90.00
c = 63.93 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-12-10
  • Released Date: 2012-09-26
  • Deposition author(s): Tomar, D., Khan, T., Singh, R.R., Mishra, S., Gupta, S., Surolia, A., Salunke, D.M.

Revision History

No revisions since initial release