3WFO

tRNA processing enzyme (apo form 1)

Structural Biology Knowledgebase: 3WFO SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.180

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3WFO

Classification: Transferase

Total Structure Weight: 182656.73

Macromolecule Entities
Molecule Chains Length Organism Details
Poly A polymerase A, B, C 525 Aquifex aeolicus EC#: 2.7.7.72 IUBMB
Gene Name(s): pcnB2 aq_2158
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
SO4
Query on SO4

A, B, C SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.4 Å
  • R-Value Free: 0.210
  • R-Value Work: 0.180
  • Space Group: C 2 2 2

Unit Cell:

Length (Å) Angle (°)
a = 177.48 α = 90.00
b = 327.77 β = 90.00
c = 78.10 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2013-07-23
  • Released Date: 2014-01-01
  • Deposition author(s): Yamashita, S., Takeshita, D., Tomita, K.

Revision History

  • 2014-08-13
    Type: Citation | Details: Citation update