3UUZ

Bovine trypsin variant X(triplePhe227) in complex with small molecule inhibitor

Structural Biology Knowledgebase: 3UUZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.144

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3UUZ

Classification: HYDROLASE / HYDROLASE inhibitor

Total Structure Weight: 48280.75

Macromolecule Entities
Molecule Chains Length Organism Details
Cationic trypsin A, B 223 Bos taurus EC#: 3.4.21.4 IUBMB
Mutation: N97E, L99Y, Y172S, P173S, G174F, Q175I, S190A, V227F, V231L
Gene Name(s):
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 3 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
0CB
Query on 0CB

A, B {[(7-carbamimidoylnaphthalen-2-yl)methyl][4- ({1-[(1E)-ethanimidoyl]piperidin-4-yl}oxy)phenyl]sulfamoyl}acetic acid
C27 H31 N5 O5 S
NPBKHEMDWREFJJ-MTDXEUNCSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A, B CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.1 Å
  • R-Value Free: 0.200
  • R-Value Work: 0.144
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 74.46 α = 90.00
b = 77.85 β = 90.00
c = 171.82 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-29
  • Released Date: 2012-12-05
  • Deposition author(s): Tziridis, A., Neumann, P., Kolenko, P., Stubbs, M.T.

Revision History

  • 2014-07-16
    Type: Citation | Details: Citation update