3UQW

Crystal structure of BACE1 with its inhibitor

Structural Biology Knowledgebase: 3UQW SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.169

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3UQW

Classification: HYDROLASE / HYDROLASE INHIBITOR

Total Structure Weight: 49095.32

Macromolecule Entities
Molecule Chains Length Organism Details
Beta-secretase 1 A 433 Homo sapiens EC#: 3.4.23.46 IUBMB 4.3.1.23 IUBMB
Fragment: UNP residues 43-454
Mutation: K75A, E77A
Gene Name(s): BACE1 Gene View BACE KIAA1149

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ZPY
Query on ZPY

A ethyl 1-{(2S,3S)-3-[(3-{[(1R)-1-(4-fluorophenyl)ethyl]carbamoyl}- 5-[methyl(methylsulfonyl)amino]benzoyl)amino]- 2-hydroxy-4-phenylbutyl}-1H-pyrazole-4-carboxylate
C34 H38 F N5 O7 S
MTFQLBNDNYIGHD-OJXBSAKDSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.215
  • R-Value Work: 0.169
  • Space Group: C 2 2 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 107.32 α = 90.00
b = 131.54 β = 90.00
c = 78.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2011-11-21
  • Released Date: 2012-11-21
  • Deposition author(s): Chen, T.T., Chen, W.Y., Xu, Y.C.

Revision History

No revisions since initial release