3POZ

EGFR Kinase domain complexed with tak-285

Structural Biology Knowledgebase: 3POZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.219

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3POZ

Classification: TRANSFERASE / TRANSFERASE INHIBITOR

Total Structure Weight: 38140.54

Macromolecule Entities
Molecule Chains Length Organism Details
Epidermal growth factor receptor A 327 Homo sapiens EC#: 2.7.10.1 IUBMB
Fragment: Residues 606-1022
Gene Name(s): EGFR Gene View ERBB ERBB1 HER1

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
03P
Query on 03P

A N-{2-[4-({3-chloro-4-[3-(trifluoromethyl)phenoxy]phenyl}amino)- 5H-pyrrolo[3,2-d]pyrimidin-5-yl]ethyl}-3- hydroxy-3-methylbutanamide
TAK-285 (Synonym)
C26 H25 Cl F3 N5 O3
ZYQXEVJIFYIBHZ-UHFFFAOYSA-N
Ligand Explorer
 
JSmol
SO4
Query on SO4

A SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
Ligand Explorer
 
JSmol
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
03P IC50: 4 - 23 nM (100) BindingDB

IC50: 23 nM  BindingMOAD
IC50: 23 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.243
  • R-Value Work: 0.219
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 46.81 α = 90.00
b = 68.88 β = 90.00
c = 104.56 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2010-11-23
  • Released Date: 2011-03-30
  • Deposition author(s): Aertgeerts, K., Skene, R., Sogabe, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4