Structure of Reovirus sigma1 in Complex with Its Receptor Junctional Adhesion Molecule-A
Primary Citation
  •   Molecular Description Hide
    Classification: Viral Protein/cell Adhesion
    Structure Weight: 176640.60
    Molecule: Outer capsid protein sigma-1
    Polymer: 1 Type: protein Length: 165
    Chains: A, B, C, D, E, F
    Fragment: head domain
    Organism: Mammalian orthoreovirus 3 Dearing
    Gene Name: S1
    UniProtKB: Search PDB | P03528   Protein Feature View
    Molecule: Junctional adhesion molecule A
    Polymer: 2 Type: protein Length: 104
    Chains: G, H, I, J, K, L
    Fragment: D1 domain
    Organism: Homo sapiens
    Gene Names: JAM1 JCAM UNQ264/PRO301 Gene View for F11R
    UniProtKB: Search PDB | Q9Y624   Protein Feature View
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  •   Related Citations in PDB Entry (REMARK 1) Hide
  •   Source Hide
    Polymer: 1
    Scientific Name: Reovirus   Taxonomy   Expression System: Escherichia coli  
    Polymer: 2
    Scientific Name: Homo sapiens   Taxonomy   Common Name: Human Expression System: Escherichia coli  
  •   Related PDB Entries Hide
    Identifier Details
    1KKE   reovirus sigma1 head domain and parts of the tail 
    1NBQ   human junctional adhesion molecule-A, domains D1 and D2 
    2OJ5   reovirus sigma1 head domain at high resolution 
  •   External Domain Annotations Hide
  •   Structural Biology Knowledgebase Data Hide
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Kirchner, E.,  Guglielmi, K.M.,  Dermody, T.S.,  Stehle, T.

    Deposition:   2008-09-29
    Release:   2008-11-04
    Last Modified (REVDAT):   2009-03-03
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  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   3.40
    R-Value: 0.210 (obs.)
    R-Free: 0.252
    Space Group: P 21 21 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 105.94 α = 90.00 
    b = 124.34 β = 90.00 
    c = 130.66 γ = 90.00