3CPL

Crystal Structure of H-2Db in complex with a variant M6A of the NP366 peptide from influenza A virus

Structural Biology Knowledgebase: 3CPL SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.220

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3CPL

Classification: IMMUNE SYSTEM

Total Structure Weight: 89322.77

Macromolecule Entities
Molecule Chains Length Organism Details
H-2 class I histocompatibility antigen, D-B alpha chain A, C 275 Mus musculus Fragment: residues 1-275 (UNIPROT 25-299)
Gene Name(s): H2-D1
Beta-2-microglobulin B, D 99 Mus musculus Gene Name(s): B2m
NP366 peptide E, F 9 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.286
  • R-Value Work: 0.220
  • Space Group: P 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 57.71 α = 99.95
b = 69.70 β = 111.04
c = 72.38 γ = 110.48

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2008-03-31
  • Released Date: 2008-11-18
  • Deposition author(s): Kedzierska, K., Guillonneau, C., Hatton, L.A., Stockwell, D., Gras, S., Webby, R., Rossjohn, J., Purcell, A.W., Doherty, P.C., Turner, S.J.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4