3BG9

Crystal Structure of Human Pyruvate Carboxylase (missing the biotin carboxylase domain at the N-terminus) F1077A Mutant

Structural Biology Knowledgebase: 3BG9 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 3BG9

Classification: LIGASE

Total Structure Weight: 315103.25

Macromolecule Entities
Molecule Chains Length Organism Details
Pyruvate carboxylase, mitochondrial A, B, C, D 718 Homo sapiens EC#: 6.4.1.1 IUBMB
Fragment: CT+PT+BCCP Domain
Mutation: F1077A
Gene Name(s): PC Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
MN
Query on MN

A, B, C, D MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.0 Å
  • R-Value Free: 0.236
  • R-Value Work: 0.189
  • Space Group: P 31 2 1

Unit Cell:

Length (Å) Angle (°)
a = 107.54 α = 90.00
b = 107.54 β = 90.00
c = 524.47 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-11-26
  • Released Date: 2008-02-26
  • Deposition author(s): Xiang, S., Tong, L.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4