2YZU

Crystal structure of oxidized thioredoxin from Thermus thermophilus HB8

Structural Biology Knowledgebase: 2YZU SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.250

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2YZU

Classification: ELECTRON TRANSPORT

Total Structure Weight: 12486.15

Macromolecule Entities
Molecule Chains Length Organism Details
Thioredoxin A 109 Thermus thermophilus Fragment: Residues 2-110
Gene Name(s): TTHA1747

Small Molecules
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
MSE
Query on MSE
A L-PEPTIDE LINKING C5 H11 N O2 Se MET

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.271
  • R-Value Work: 0.250
  • Space Group: P 43 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 58.38 α = 90.00
b = 58.38 β = 90.00
c = 59.85 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-05-06
  • Released Date: 2007-11-06
  • Deposition author(s): Ebihara, A., Yanai, H., Yokoyama, S., Kuramitsu, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History

  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4