2WPV

CRYSTAL STRUCTURE OF S. CEREVISIAE GET4-GET5 COMPLEX

Structural Biology Knowledgebase: 2WPV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.175

Literature

Macromolecules
Sequence Display for 2WPV

Classification: PROTEIN BINDING

Total Structure Weight: 172623.72

Macromolecule Entities
Molecule Chains Length Organism Details
UPF0363 PROTEIN YOR164C A, C, E, G 312 Saccharomyces cerevisiae Gene Name(s): GET4 Gene View YOR164C O3580
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
UBIQUITIN-LIKE PROTEIN MDY2 B, D, F, H 59 Saccharomyces cerevisiae Fragment: GET4 BINDING DOMAIN, RESIDUES 1-59
Gene Name(s): MDY2 GET5 TMA24 YOL111C
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HG
Query on HG

A, C, E, G MERCURY (II) ION
Hg
BQPIGGFYSBELGY-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.99 Å
  • R-Value Free: 0.206
  • R-Value Work: 0.175
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 48.28 α = 90.00
b = 118.77 β = 95.17
c = 168.38 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2009-08-11
  • Released Date: 2010-01-26
  • Deposition author(s): Chang, Y.-W., Chuang, Y.-C., Ho, Y.-C., Cheng, M.-Y., Sun, Y.-J., Hsiao, C.-D., Wang, C.

Revision History

  • 2011-08-03
    Type: Entry authorship | Details: AUTHOR
  • 2011-08-03
    Type: Secondary structure | Details: SHEET
  • 2011-08-03
    Type: Other | Details: REMARK 700,REMARK 650,MASTER
  • 2011-08-03
    Type: Version format compliance | Details: REMARK 4
  • 2011-08-03
    Type: Function and keywords | Details: KEYWDS
  • 2011-08-03
    Type: Refinement description | Details: REMARK 3
  • 2011-08-03
    Type: Citation | Details: JRNL
  • 2011-08-03
    Type: Geometry validation | Details: REMARK 500