2UZB

CRYSTAL STRUCTURE OF HUMAN CDK2 COMPLEXED WITH A THIAZOLIDINONE INHIBITOR

Structural Biology Knowledgebase: 2UZB SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.201

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2UZB

Classification: TRANSFERASE

Total Structure Weight: 128089.43

Macromolecule Entities
Molecule Chains Length Organism Details
CELL DIVISION PROTEIN KINASE 2 A, C 298 Homo sapiens EC#: 2.7.11.22 IUBMB
Details: THR160 PHOSPHORYLATED
Gene Name(s): CDK2 Gene View CDKN2
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
CYCLIN-A2 B, D 258 Homo sapiens Fragment: RESIDUES 175-432
Gene Name(s): CCNA2 Gene View CCN1 CCNA
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
C75
Query on C75

A, C 4-{5-[(Z)-(2-IMINO-4-OXO-1,3-THIAZOLIDIN- 5-YLIDENE)METHYL]-2-FURYL}-N-METHYLBENZENESULFONAMIDE
C15 H13 N3 O4 S2
FJJJERLTHDXEPT-JYRVWZFOSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
C75 N/A in BindingDB
N/A in BindingMoad
IC50: 120 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
TPO
Query on TPO
A, C L-PEPTIDE LINKING C4 H10 N O6 P THR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.7 Å
  • R-Value Free: 0.265
  • R-Value Work: 0.201
  • Space Group: P 21 21 2
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 151.47 α = 90.00
b = 163.70 β = 90.00
c = 73.19 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2007-04-27
  • Released Date: 2007-06-26
  • Deposition author(s): Richardson, C.M., Dokurno, P., Murray, J.B., Surgenor, A.E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4