STRUCTURE OF NATIVE UREASE FROM BACILLUS PASTEURII
2UBP
Primary Citation
 
 
  •   Molecular Description Hide
    Classification: Hydrolase
    Structure Weight: 86577.16
    Molecule: PROTEIN (UREASE GAMMA SUBUNIT)
    Polymer: 1 Type: protein Length: 101
    Chains: A
    EC#: 3.5.1.5   
    Organism: Sporosarcina pasteurii
    Gene Name: ureA
    UniProtKB: Search PDB | P41022   Protein Feature View
    Molecule: PROTEIN (UREASE BETA SUBUNIT)
    Polymer: 2 Type: protein Length: 122
    Chains: B
    EC#: 3.5.1.5   
    Organism: Sporosarcina pasteurii
    Gene Name: ureB
    UniProtKB: Search PDB | P41021   Protein Feature View
    Molecule: PROTEIN (UREASE ALPHA SUBUNIT)
    Polymer: 3 Type: protein Length: 570
    Chains: C
    EC#: 3.5.1.5   
    Organism: Sporosarcina pasteurii
    Gene Name: ureC
    UniProtKB: Search PDB | P41020   Protein Feature View
     
  •   Structure Validation Hide

    View the full validation report  

     

  • MolProbity Ramachandran Plot
     

  •   Related Citations in PDB Entry (REMARK 1) Hide
     
  •   Source Hide
    Polymer: 1
    Scientific Name: Sporosarcina pasteurii   Taxonomy    
    Polymer: 2
    Scientific Name: Sporosarcina pasteurii   Taxonomy    
    Polymer: 3
    Scientific Name: Sporosarcina pasteurii   Taxonomy    
     
  •   Ligand Chemical Component Hide
    Identifier Formula Name View Interactions
    NI
    Search 
    Download 
    NI Ni
    NICKEL (II) ION
    SO4
    Search 
    Download 
    SO4 O4 S
    SULFATE ION
     
  •   Modified Residues Hide
    Identifier Formula Parent Type
    ACE
    Search 
    ACE C2 H4 O nonPolymer
    KCX
    Search 
    KCX C7 H14 N2 O4 LYS lPeptideLinking
     
  •   External Domain Annotations Hide
     
  •   Structural Biology Knowledgebase Data Hide
     
 
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly 1       
Biological assembly 1 assigned by authors and generated by PISA (software)
Downloadable viewers:
 
 
 
  •   MyPDB Personal Annotations Hide
     
  •   Deposition Summary Hide
    Authors:   Benini, S.,  Rypniewski, W.R.,  Wilson, K.S.,  Ciurli, S.,  Mangani, S.

    Deposition:   1998-11-04
    Release:   1999-11-08
    Last Modified (REVDAT):   2011-07-13
     
  •   Revision History    Hide
    Mouse over text for details
    2011-07-13
    Biological assembly
    2011-07-13
    Version format compliance
     
  •   Experimental Details Hide
    Method:   X-RAY DIFFRACTION
    Exp. Data:
      Structure Factors
    EDS  
    Resolution[Å]:   2.00
    R-Value: 0.160 (obs.)
    R-Free: 0.200
    Space Group: P 63 2 2
    Unit Cell:
      Length [Å] Angles [°]
    a = 131.36 α = 90.00 
    b = 131.36 β = 90.00 
    c = 189.76 γ = 120.00