2NWN

New Pharmacophore for Serine Protease Inhibition Revealed by Crystal Structure of Human Urokinase-type Plasminogen Activator Complexed with a Cyclic Peptidyl Inhibitor, upain-1

Structural Biology Knowledgebase: 2NWN SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.218

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2NWN

Classification: HYDROLASE

Total Structure Weight: 29937.30

Macromolecule Entities
Molecule Chains Length Organism Details
Plasminogen activator, urokinase A 253 Homo sapiens EC#: 3.4.21.73 IUBMB
Fragment: C-terminal domain, residues 16-250
Mutation: C122A, N145Q
Gene Name(s): PLAU Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
upain-1 B 12 synthetic


Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.15 Å
  • R-Value Free: 0.261
  • R-Value Work: 0.218
  • Space Group: H 3
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 120.48 α = 90.00
b = 120.48 β = 90.00
c = 42.12 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-11-16
  • Released Date: 2007-10-16
  • Deposition author(s): Zhao, G., Yuan, C., Wind, T., Andreasen, P.A., Huang, Z., Huang, M., Structural Genomics Consortium (SGC)

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4