Structure of a ParB-DNA complex reveals a double B-box interaction
DOI:10.2210/pdb2ntz/pdb   NDB ID: PD0909
Primary Citation
  •   Molecular Description Hide
    Classification: Cell Cycle/dna
    Structure Weight: 64050.50
    Molecule: 5'-D(*CP*GP*TP*GP*AP*AP*AP*TP*CP*GP*CP*CP*AP*CP*GP*A)-3'
    Polymer: 1 Type: dna Length: 16
    Chains: E, Y
    Molecule: 5'-D(*TP*CP*GP*TP*GP*GP*CP*GP*AP*TP*TP*TP*CP*AP*CP*G)-3'
    Polymer: 2 Type: dna Length: 16
    Chains: U, W
    Molecule: ParB
    Polymer: 3 Type: protein Length: 192
    Chains: A, B
    Fragment: residues 142-333
    Mutation: MSE:B.318, MSE:B.247, MSE:B.220, MSE:B.166, MSE:B.161, MSE:B.159, MSE:A.318, MSE:A.247, MSE:A.220 ...
    Organism: Enterobacteria phage P1
    Gene Name: parB
    UniProtKB: Search PDB | Q38420   Protein Feature View
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  • MolProbity Ramachandran Plot

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  •   Source Hide
    Polymer: 1
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 2
    Scientific Name: Synthetic construct   Taxonomy    
    Polymer: 3
    Scientific Name: Enterobacteria phage p1   Taxonomy   Expression System: Escherichia coli bl21(de3)  
  •   Related PDB Entries Hide
    Identifier Details
    1ZX4   parb-dna 
  •   Modified Residues Hide
    Identifier Formula Parent Type
    MSE C5 H11 N O2 Se MET lPeptideLinking
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  • Nucleic Acid Database Hide
    View the NDB ID associated with this structure:PD0909
Data in orange boxes are gathered from external resources (when available).
  Biological Assembly       
Biological assembly 1 assigned by authors
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  •   Deposition Summary Hide
    Authors:   Schumacher, M.A.,  Mansoor, A.,  Funnell, B.E.

    Deposition:   2006-11-08
    Release:   2007-02-20
    Last Modified (REVDAT):   2008-12-09
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  •   Experimental Details Hide
    Exp. Data:
      Structure Factors
    Resolution[Å]:   3.35
    R-Value: 0.288 (obs.)
    R-Free: 0.336
    Space Group: P 31 2 1
    Unit Cell:
      Length [Å] Angles [°]
    a = 144.42 α = 90.00 
    b = 144.42 β = 90.00 
    c = 78.88 γ = 120.00