2JC1

CRYSTAL STRUCTURE OF HEPATITIS C VIRUS POLYMERASE IN COMPLEX WITH INHIBITOR SB698223

Structural Biology Knowledgebase: 2JC1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2JC1

Classification: HYDROLASE

Total Structure Weight: 127583.61

Macromolecule Entities
Molecule Chains Length Organism Details
RNA-DEPENDENT RNA-POLYMERASE A, B 570 Hepatitis c virus Fragment: RESIDUES 1-570
Mutation: R120H, E131V, A185V, C213N, R254K, C316N, T329V, A338V, Q464E, R531K
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
698
Query on 698

A, B (2S,4S,5R)-1-(4-TERT-BUTYLBENZOYL)-2-ISOBUTYL- 5-(1,3-THIAZOL-2-YL)PYRROLIDINE-2,4-DICARBOXYLIC ACID
C24 H30 N2 O5 S
SWYJAQWTBADJTB-RHGYRFJNSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
698 N/A in BindingDB
IC50: 3800 nM  BindingMOAD
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.0 Å
  • R-Value Free: 0.233
  • R-Value Work: 0.191
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 86.24 α = 90.00
b = 106.26 β = 90.00
c = 126.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-12-18
  • Released Date: 2007-02-13
  • Deposition author(s): Wonacott, A., Skarzynski, T., Singh, O.M.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4