2HOZ

Inter-subunit signaling in GSAM

Structural Biology Knowledgebase: 2HOZ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.197

Literature

Macromolecules
Sequence Display for 2HOZ

Classification: ISOMERASE

Total Structure Weight: 92748.47

Macromolecule Entities
Molecule Chains Length Organism Details
Glutamate-1-semialdehyde 2,1-aminomutase (GSAM) pmp-form A, B 432 Synechococcus elongatus EC#: 5.4.3.8 IUBMB
Mutation: I1108N, L1133I, D1172S, S1179K, A1187T, A1327G
Gene Name(s): hemL gsa syc0881_c
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
PMP
Query on PMP

A, B 4'-DEOXY-4'-AMINOPYRIDOXAL-5'-PHOSPHATE
PYRIDOXAMINE-5'-PHOSPHATE (Synonym)
C8 H13 N2 O5 P
ZMJGSOSNSPKHNH-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
HOZ
Query on HOZ

A (4S)-4,5-DIAMINOPENTANOIC ACID
C5 H12 N2 O2
PQGAAJQIFBEYSA-BYPYZUCNSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.250
  • R-Value Work: 0.197
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 65.42 α = 90.00
b = 107.78 β = 90.00
c = 121.06 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2006-07-17
  • Released Date: 2006-08-22
  • Deposition author(s): Stetefeld, J.

Revision History

  • 2011-07-13
    Type: Biological assembly | Details: Added software calculated values
  • 2011-07-13
    Type: Source and taxonomy | Details: Removed strain from scientific name
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4