2BZK

CRYSTAL STRUCTURE OF THE HUMAN PIM1 IN COMPLEX WITH AMPPNP AND PIMTIDE

Structural Biology Knowledgebase: 2BZK SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.189

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BZK

Classification: TRANSFERASE / PEPTIDE

Total Structure Weight: 37729.97

Macromolecule Entities
Molecule Chains Length Organism Details
PIMTIDE A 15 Homo sapiens Fragment: PIM1 CONSENSUS PEPTIDE, RESIDUES 3-9
PROTO-ONCOGENE SERINE THREONINE PROTEIN KINASE PIM1 B 313 Homo sapiens EC#: 2.7.11.1 IUBMB
Mutation: R250G
Details: ISOFORM MUTATION R250G
Gene Name(s): PIM1 Gene View

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
ANP
Query on ANP

B PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
C10 H17 N6 O12 P3
PVKSNHVPLWYQGJ-KQYNXXCUSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
NH2
Query on NH2
A NON-POLYMER H2 N --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.225
  • R-Value Work: 0.189
  • Space Group: P 65
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 97.89 α = 90.00
b = 97.89 β = 90.00
c = 80.49 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-08-18
  • Released Date: 2005-11-03
  • Deposition author(s): Debreczeni, J.E., Bullock, A., Knapp, S., Von Delft, F., Sundstrom, M., Arrowsmith, C., Weigelt, J., Edwards, A.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: Compliance with PDBx exchange dictionary V4
  • 2011-07-13
    Type: Flag residual B-value | Details: Tagged residual B temperature factor