2BPQ

Anthranilate phosphoribosyltransferase (TrpD) from Mycobacterium tuberculosis (Apo structure)

Structural Biology Knowledgebase: 2BPQ SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.191

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 2BPQ

Classification: TRANSFERASE

Total Structure Weight: 76547.25

Macromolecule Entities
Molecule Chains Length Organism Details
ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE A, B 373 Mycobacterium tuberculosis EC#: 2.4.2.18 IUBMB
Gene Name(s): trpD MT2248

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BEN
Query on BEN

A, B BENZAMIDINE
C7 H8 N2
PXXJHWLDUBFPOL-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
GOL
Query on GOL

A, B GLYCEROL
2, (Synonym)
C3 H8 O3
PEDCQBHIVMGVHV-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.9 Å
  • R-Value Free: 0.230
  • R-Value Work: 0.191
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 80.87 α = 90.00
b = 82.42 β = 90.00
c = 117.52 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2005-04-22
  • Released Date: 2006-01-04
  • Deposition author(s): Lee, C.E., Goodfellow, C., Javid-Majd, F., Baker, E.N., Lott, J.S., TB Structural Genomics Consortium (TBSGC)

Revision History

  • 2015-04-29
    Type: Geometry validation | Details: REMARK 500
  • 2015-04-29
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2015-04-29
    Type: Version format compliance | Details: REMARK 4
  • 2015-04-29
    Type: Non-polymer description | Details: FORMUL,HETSYN
  • 2015-04-29
    Type: Other | Details: REMARK 525