NMR Ensemble

1Y5O

NMR structure of the amino-terminal domain from the Tfb1 subunit of yeast TFIIH

Structural Biology Knowledgebase: 1Y5O SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 62
  • Conformers Submitted: 20
  • Selection Criteria: The Submitted Models Are the 20 Structures with No Upper Bound Violation Greater Than 0.2 Armstrong No Dihedral Angle Restraint Violation Greater Than 2 Degrees and with the Lowest Energies.

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1Y5O

Classification: TRANSCRIPTION

Total Structure Weight: 12903.81

Macromolecule Entities
Molecule Chains Length Organism Details
RNA polymerase II transcription factor B 73 kDa subunit A 115 Saccharomyces cerevisiae Fragment: sequence database residues 1-115
Mutation: M1P
Gene Name(s): TFB1 YDR311W D9740.3


Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 62
  • Conformers Submitted: 20
  • Selection Criteria: THE SUBMITTED MODELS ARE THE 20 STRUCTURES WITH NO UPPER BOUND VIOLATION GREATER THAN 0.2 ARMSTRONG, NO DIHEDRAL ANGLE RESTRAINT VIOLATION GREATER THAN 2 DEGREES AND WITH THE LOWEST ENERGIES.

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-12-02
  • Released Date: 2005-05-17
  • Deposition author(s): Di Lello, P., Nguyen, B.D., Jones, T.N., Potempa, K., Kobor, M.S., Legault, P., Omichinski, J.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4