1XFP

Crystal structure of the CDR2 germline reversion mutant of cAb-Lys3 in complex with hen egg white lysozyme

Structural Biology Knowledgebase: 1XFP SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.201

Literature

Macromolecules
Sequence Display for 1XFP

Classification: IMMUNE SYSTEM / HYDROLASE

Total Structure Weight: 29830.01

Macromolecule Entities
Molecule Chains Length Organism Details
heavy chain antibody A 142 Camelus dromedarius Fragment: VHH domain
Lysozyme C L 129 Gallus gallus EC#: 3.2.1.17 IUBMB
Gene Name(s): LYZ Gene View
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
FMT
Query on FMT

A, L FORMIC ACID
C H2 O2
BDAGIHXWWSANSR-UHFFFAOYSA-N
Ligand Explorer NGL
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.5 Å
  • R-Value Free: 0.216
  • R-Value Work: 0.201
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 128.29 α = 90.00
b = 72.33 β = 106.74
c = 38.77 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-09-15
  • Released Date: 2004-09-28
  • Deposition author(s): De Genst, E., Handelberg, F., Van Meirhaeghe, A., Vynck, S., Loris, R., Wyns, L., Muyldermans, S.

Revision History

  • 2013-02-06
    Type: Biological assembly | Details: fixed remark 350
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4