1TL1

CRYSTAL STRUCTURE OF HIV-1 REVERSE TRANSCRIPTASE IN COMPLEX WITH GW451211

Structural Biology Knowledgebase: 1TL1 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.221

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1TL1

Classification: TRANSFERASE

Total Structure Weight: 116632.13

Macromolecule Entities
Molecule Chains Length Organism Details
Pol polyprotein, Reverse transcriptase, Chain A A 560 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Fragment: P66
Mutation: C280X
Gene Name(s): gag-pol
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG
Pol polyprotein, Reverse transcriptase, Chain B B 440 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Fragment: P51
Gene Name(s): gag-pol

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
H18
Query on H18

A 6-CHLORO-4-(CYCLOHEXYLSULFINYL)-3-PROPYLQUINOLIN- 2(1H)-ONE
C18 H22 Cl N O2 S
QRBUGQMJMFAHKS-HSZRJFAPSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PO4
Query on PO4

A PHOSPHATE ION
O4 P
NBIIXXVUZAFLBC-UHFFFAOYSA-K
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
H18 IC50: 380 - 2380 nM (99) BindingDB

N/A in BindingMoad
IC50: 380 nM  PDBbind
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
CSD
Query on CSD
A L-PEPTIDE LINKING C3 H7 N O4 S CYS

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.281
  • R-Value Work: 0.221
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 137.50 α = 90.00
b = 115.30 β = 90.00
c = 65.40 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-06-09
  • Released Date: 2004-12-07
  • Deposition author(s): Hopkins, A.L., Ren, J., Stuart, D.I., Stammers, D.K.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4