1S6P

CRYSTAL STRUCTURE OF HUMAN IMMUNODEFICIENCY VIRUS TYPE 1 REVERSE TRANSCRIPTASE (RT) IN COMPLEX WITH JANSSEN-R100943

Structural Biology Knowledgebase: 1S6P SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.312
  • R-Value Work: 0.245

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1S6P

Classification: TRANSFERASE

Total Structure Weight: 115171.57

Macromolecule Entities
Molecule Chains Length Organism Details
POL polyprotein [Contains: Reverse transcriptase] A 560 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Fragment: P66 SUBUNIT
Mutation: C280S
Gene Name(s): gag-pol
POL polyprotein [Contains: Reverse transcriptase] B 430 Human immunodeficiency virus 1 EC#: 2.7.7.49 IUBMB
Fragment: P51 SUBUNIT
Mutation: C280S
Gene Name(s): gag-pol

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
IET
Query on IET

A 1-(4-CYANO-PHENYL)-3-[2-(2,6-DICHLORO-PHENYL)- 1-IMINO-ETHYL]-THIOUREA
C16 H12 Cl2 N4 S
NWKJBFSBEAMDBE-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.312
  • R-Value Work: 0.245
  • Space Group: C 1 2 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 226.70 α = 90.00
b = 67.40 β = 107.00
c = 104.30 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-01-26
  • Released Date: 2004-05-11
  • Deposition author(s): Das, K., Arnold, E.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4