1S0R

Bovine Pancreatic Trypsin inhibited with Benzamidine at Atomic resolution

Structural Biology Knowledgebase: 1S0R SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.02 Å
  • R-Value Free: 0.137
  • R-Value Work: 0.111

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1S0R

Classification: HYDROLASE

Total Structure Weight: 23484.64

Macromolecule Entities
Molecule Chains Length Organism Details
Trypsinogen A 223 Bos taurus EC#: 3.4.21.4 IUBMB
Fragment: Trypsin
Gene Name(s):

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
BEN
Query on BEN

A BENZAMIDINE
C7 H8 N2
PXXJHWLDUBFPOL-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CA
Query on CA

A CALCIUM ION
Ca
BHPQYMZQTOCNFJ-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
BEN Ki: 31 - 39000 nM (100) BindingDB

N/A in BindingMoad
N/A in PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.02 Å
  • R-Value Free: 0.137
  • R-Value Work: 0.111
  • Space Group: P 21 21 21

Unit Cell:

Length (Å) Angle (°)
a = 54.39 α = 90.00
b = 58.42 β = 90.00
c = 66.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2004-01-02
  • Released Date: 2005-01-18
  • Deposition author(s): Chamorro Gavilanes, J.A., Garca-Granda, S.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4