NMR Ensemble

1R9U

Refined structure of peptaibol zervamicin IIB in methanol solution from trans-hydrogen bond J couplings

Structural Biology Knowledgebase: 1R9U SBKB.org


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 1000
  • Conformers Submitted: 24
  • Selection Criteria: Structures with the Least Restraint Violations Structures with the Lowest Energy Target Function

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1R9U

Classification: ANTIBIOTIC

Total Structure Weight: 1823.20

Macromolecule Entities
Molecule Chains Length Organism Details
ZERVAMICIN IIB A 17 Emericellopsis salmosynnemata

Small Molecules
Biologically Interesting Molecules 1 Unique
ID Chains Name Type/Class 2D Diagram 3D Interactions
PRD_000159 (GLN,ACE,TRP,THR,DIV,HYP,PHL,PRO,LEU,ILE,AIB) A Zervamicin IIB Peptaibol /
Antibiotic
Ligand Explorer

Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 1000
  • Conformers Submitted: 24
  • Selection Criteria: STRUCTURES WITH THE LEAST RESTRAINT VIOLATIONS, STRUCTURES WITH THE LOWEST ENERGY,TARGET FUNCTION

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-10-31
  • Released Date: 2004-11-09
  • Deposition author(s): Shenkarev, Z.O., Balashova, T.A., Yakimenko, Z.A., Ovchinnikova, T.V., Arseniev, A.S.

Revision History

  • 2012-12-12
    Type: Other | Details: Add PRD info
  • 2011-07-27
    Type: Linkage | Details: Linkage
  • 2011-07-27
    Type: Sequence database correspondence | Details: Sequence database correspondence
  • 2011-07-27
    Type: Polymer description | Details: Changed inhibitor presentation or chemistry
  • 2011-07-27
    Type: Atom nomenclature | Details: Atom nomenclature
  • 2011-07-27
    Type: Binding sites and description | Details: Binding sites and description
  • 2011-07-27
    Type: Non-polymer description | Details: Non-polymer description
  • 2011-07-27
    Type: Function and keywords | Details: Function and keywords
  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4