1QD7

PARTIAL MODEL FOR 30S RIBOSOMAL SUBUNIT

Structural Biology Knowledgebase: 1QD7 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.5 Å
  • R-Value Work:

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1QD7

Classification: RIBOSOME

Total Structure Weight: 175572.44


Macromolecule Entities
Molecule Chains Length Organism Details
S4 RIBOSOMAL PROTEIN C 159 Thermus thermophilus Mutation: I120L
Gene Name(s): rpsD
S5 RIBOSOMAL PROTEIN D 145 Thermus thermophilus Gene Name(s): rpsE
S6 RIBOSOMAL PROTEIN E 97 Thermus thermophilus Gene Name(s): rpsF TTHA0245
S7 RIBOSOMAL PROTEIN F 135 Thermus thermophilus Gene Name(s): rpsG rps7 TTHA1696
S8 RIBOSOMAL PROTEIN G 136 Thermus thermophilus Mutation: E25D, K37R, E52D, I61V, H62Y, K81H, R88K, P115S
Gene Name(s): rpsH TTHA1678
S15 RIBOSOMAL PROTEIN H 85 Thermus thermophilus Gene Name(s): rpsO
S17 RIBOSOMAL PROTEIN I 89 Thermus thermophilus Mutation: V85R, L86A
Gene Name(s): rpsQ
S20 RIBOSOMAL PROTEIN J 100 Thermus thermophilus
Macromolecule Entities
Molecule Chains Length Organism Details
CENTRAL FRAGMENT OF 16 S RNA A 271 Thermus thermophilus
END FRAGMENT OF 16 S RNA B 88 Thermus thermophilus

Small Molecules
Modified Residues 2 Unique
ID Chains Type Formula 2D Diagram Parent
N
Query on N
A, B RNA LINKING C5 H11 O7 P --
UNK
Query on UNK
J L-PEPTIDE LINKING C4 H9 N O2 --

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 5.5 Å
  • R-Value Observed:
  • Space Group: P 41 21 2

Unit Cell:

Length (Å) Angle (°)
a = 401.60 α = 90.00
b = 401.60 β = 90.00
c = 174.50 γ = 90.00

Structure Validation

View Full Validation Report



Entry History

Deposition Data

  • Deposited Date: 1999-07-09
  • Released Date: 1999-08-31
  • Deposition author(s): Clemons Jr., W.M., May, J.L.C., Wimberly, B.T., McCutcheon, J.P., Capel, M.S., Ramakrishnan, V.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4