1PKD

THE CRYSTAL STRUCTURE OF UCN-01 IN COMPLEX WITH PHOSPHO-CDK2/CYCLIN A

Structural Biology Knowledgebase: 1PKD SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.215

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1PKD

Classification: TRANSFERASE / CELL CYCLE

Total Structure Weight: 127961.08

Macromolecule Entities
Molecule Chains Length Organism Details
Cell division protein kinase 2 A, C 297 Homo sapiens EC#: 2.7.11.22 IUBMB
Mutation: T160X
Gene Name(s): CDK2 Gene View CDKN2
Cyclin A2 B, D 258 Homo sapiens Gene Name(s): CCNA2 Gene View CCN1 CCNA

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
UCN
Query on UCN

A, C 7-HYDROXYSTAUROSPORINE
C28 H26 N4 O4
PBCZSGKMGDDXIJ-HQCWYSJUSA-N
Ligand Explorer
 
JSmol
Modified Residues 1 Unique
ID Chains Type Formula 2D Diagram Parent
TPO
Query on TPO
A, C L-PEPTIDE LINKING C4 H10 N O6 P THR

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.268
  • R-Value Work: 0.215
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 73.62 α = 90.00
b = 134.57 β = 90.00
c = 147.97 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-06-05
  • Released Date: 2003-06-24
  • Deposition author(s): Johnson, L.N., De Moliner, E., Brown, N.R., Song, H.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4