1PG4

Acetyl CoA Synthetase, Salmonella enterica

Structural Biology Knowledgebase: 1PG4 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.184

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1PG4

Classification: LIGASE

Total Structure Weight: 147109.69

Macromolecule Entities
Molecule Chains Length Organism Details
acetyl-CoA synthetase A, B 652 Salmonella enterica EC#: 6.2.1.1 IUBMB
Mutation: R174C
Gene Name(s): acs STM4275
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 5 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
COA
Query on COA

A, B COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
PRX
Query on PRX

A, B ADENOSINE-5'-MONOPHOSPHATE-PROPYL ESTER
ADENOSINE-5'-PROPYLPHOSPHATE (Synonym)
C13 H20 N5 O7 P
XAMXMSZRQHPMRX-QYVSTXNMSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
EDO
Query on EDO

A, B 1,2-ETHANEDIOL
ETHYLENE GLYCOL (Synonym)
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
CL
Query on CL

A, B CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
MG
Query on MG

A, B MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.75 Å
  • R-Value Free: 0.211
  • R-Value Work: 0.184
  • Space Group: P 1 21 1
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 59.99 α = 90.00
b = 143.02 β = 91.32
c = 71.73 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-05-27
  • Released Date: 2003-06-03
  • Deposition author(s): Gulick, A.M., Starai, V.J., Horswill, A.R., Homick, K.M., Escalante-Semerena, J.C.
  • Previous versions: 1NNM

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4