1OG5

STRUCTURE OF HUMAN CYTOCHROME P450 CYP2C9

Structural Biology Knowledgebase: 1OG5 SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.225

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1OG5

Classification: ELECTRON TRANSPORT

Total Structure Weight: 110192.19

Macromolecule Entities
Molecule Chains Length Organism Details
CYTOCHROME P450 2C9 A, B 475 Homo sapiens Fragment: SOLUBLE DOMAIN, RESIDUES 30-490
Mutation: K206E, I215V, C216Y, S220P, P221A, I222L, I223L
Gene Name(s): CYP2C9 Gene View CYP2C10
Metabolic Pathways
Maps:       
Reactions:
ESCHER  BiGG

Small Molecules
Ligands 2 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
HEC
Query on HEC

A, B HEME C
C34 H34 Fe N4 O4
HXQIYSLZKNYNMH-LJNAALQVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
SWF
Query on SWF

A, B S-WARFARIN
C19 H16 O4
PJVWKTKQMONHTI-HNNXBMFYSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.55 Å
  • R-Value Free: 0.257
  • R-Value Work: 0.225
  • Space Group: P 3 2 1

Unit Cell:

Length (Å) Angle (°)
a = 164.76 α = 90.00
b = 164.76 β = 90.00
c = 110.76 γ = 120.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2003-04-24
  • Released Date: 2003-07-17
  • Deposition author(s): Williams, P.A., Cosme, J., Ward, A., Angove, H.C., Matak Vinkovic, D., Jhoti, H.

Revision History

  • 2011-11-09
    Type: Polymer description | Details: COMPND,REMARK 400
  • 2011-11-09
    Type: Biological assembly | Details: REMARK 300,REMARK 350
  • 2011-11-09
    Type: Geometry validation | Details: REMARK 500
  • 2011-11-09
    Type: Non-polymer description | Details: HETSYN,FORMUL
  • 2011-11-09
    Type: Other | Details: REMARK 525,REMARK 280
  • 2011-11-09
    Type: Version format compliance | Details: REMARK 4