1NHV

Hepatitis C virus RNA polymerase in complex with non-nucleoside analogue inhibitor

Structural Biology Knowledgebase: 1NHV SBKB.org


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.250

wwPDB Validation Full Report


Literature

Macromolecules
Sequence Display for 1NHV

Classification: TRANSFERASE

Total Structure Weight: 129625.31

Macromolecule Entities
Molecule Chains Length Organism Details
HEPATITIS C VIRUS NS5B RNA-DEPENDENT RNA POLYMERASE A, B 578 Hepatitis c virus EC#: 2.7.7.48 IUBMB
Fragment: residues 2420-2989 of polyprotein
Gene Name(s):

Small Molecules
Ligands 1 Unique
ID Chains Name / Formula / InChI Key 2D Diagram 3D Interactions
154
Query on 154

A, B (2S)-2-[(5-BENZOFURAN-2-YL-THIOPHEN-2-YLMETHYL)- (2,4-DICHLORO-BENZOYL)-AMINO]-3-PHENYL-PROPIONIC ACID
C29 H21 Cl2 N O4 S
YBULOUKTPCHXAL-DEOSSOPVSA-N
Ligand Explorer
 
Binding Pocket (JSmol)
 
Electron Density (JSmol)
External Ligand Annotations
ID Binding Affinity (Sequence Identity %)
154 N/A in BindingDB
N/A in BindingMoad
Ki: 2200 nM  PDBbind

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.9 Å
  • R-Value Free: 0.280
  • R-Value Work: 0.250
  • Space Group: P 21 21 21
  • Electron Density Server: EDS EDS

Unit Cell:

Length (Å) Angle (°)
a = 85.50 α = 90.00
b = 107.83 β = 90.00
c = 126.54 γ = 90.00

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History

Deposition Data

  • Deposited Date: 2002-12-19
  • Released Date: 2003-03-18
  • Deposition author(s): Wang, M., Ng, K.K.S., Cherney, M.M., Chan, L., Yannopoulos, C.G., Bedard, J., Morin, N., Nguyen-Ba, N., Alaoui-Ismaili, M.H., Bethell, R.C., James, M.N.G.

Revision History

  • 2011-07-13
    Type: Version format compliance | Details: compliance with PDB Exchange Dictionary V4